Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907670.1_cds_XP_016457770.1_51462
CDS Infomation

[gene=LOC107781559] [db_xref=GeneID:107781559] [protein=autophagy-related protein 18a-like] [protein_id=XP_016457770.1] [location=join(48109..48972,49759..49957,52237..52363,53213..53303)] [gbkey=CDS]
Sequence

ATGGCCACTGTTTCCCCTCTTCCCCCACCATTTCAGCACCCAACCACTAATTCAAAGTTT
AAGTCACCAATGCTTCAACCTTACTTAGAGCAACTAGAAGAACAACACAAACAACAGCTT
CAGCCGAAGCAACAAGATGCTGTTGAGCAGGTAGATAATGAGCCTGAGCAGGGTCCCCTT
ATCCAAAACCTTAGCTCATGTCCTAATCATGGTTTGATCAATCAGTCAATCTCAACTCTA
TACCGTGTTTCATTCAATCAAAACAGTAGCTGTTTTGCCATTGGCACTGATCGTGGCATT
ACAGTCTATAGCTGTGACCCTTTCAGAAAGATGTTTCAACGGTACTTTGACAATGGAGGT
GGTATTGAAATTATTGAGATGCTCTTCTGCAGCAACATACTAGTCTTTGTTGGAAGTGGA
GATAATCCACAATATCCTCGAAACAAGGTCATAATTTGGGATGATCATCAGAGCCGCTGC
TTGGGCGAACTCTGTTTCCGGTCGGCTGTGCGTAGTGTCCGGCTTCGACGTGACTGCATC
GTAGTTATACTTGAGCAGAAGATATTTATATATAATTTTGCTGACATGAAGATCGTCCAC
CAGATTGAGACAATTGTAAACCCAAAGGGACTCTGTGAGATTTCACAAGCGACTGGATCA
CCTGTGCTGGTGTGCCCTGGATTACGAAATGGTGAAGTTCGTGTTGAGCATTTCACTTCA
AAAAGGACTAAGTTTATTTTTGCGCATGATTCTAAGACTGCATCTTTTGCACTTAGTCAT
GAGGGGCATGTGCTGGCAACAGCAAGTATCAAGGGTACTCTTATCCGGATTTTCAGCACA
CAGGATGGTACGTTATTGCAGGAGGTGCGGAGAGGTGCTGATAGAGCAGAAATTCACAGT
GTTTCATTCTCTCCGACTGCTGAGTGGCTAGCAGTCTCTAGTGACAAAGGCACTGTTCAT
CTTTTTAGGATCAAGCATCTTGGGAACCAGGATAAGACAAATACTCCTCCTAATTCCCGT
CTTACTCTGGCGGCATCGAGTTCACCATTCTCCTTCATCAAAGGAGTGCTTCCAAAATAT
TTTAGCTCAGAATGGTCAGTGGCGCAATTCCGGTTGCCTGGTGACTCCGAGTATATTGTC
ACATTTGGTCACGAAAAGAATACATTGATAATTCTTGGCTTGGATGGAAGCTTTATTAGA
TGCAAGTTTGACCCAGCCTCTGGCAAAGAGATGACTCAGTTGGAAATTCACAACTTTCTT
AAGTCTGATAAGGCCTCGTAA

Peptide Sequence

PEP ID

XP_016457770.1
PEP Infomation

PREDICTED: autophagy-related protein 18a-like [Nicotiana tabacum]
Sequence

MATVSPLPPPFQHPTTNSKFKSPMLQPYLEQLEEQHKQQLQPKQQDAVEQVDNEPEQGPL
IQNLSSCPNHGLINQSISTLYRVSFNQNSSCFAIGTDRGITVYSCDPFRKMFQRYFDNGG
GIEIIEMLFCSNILVFVGSGDNPQYPRNKVIIWDDHQSRCLGELCFRSAVRSVRLRRDCI
VVILEQKIFIYNFADMKIVHQIETIVNPKGLCEISQATGSPVLVCPGLRNGEVRVEHFTS
KRTKFIFAHDSKTASFALSHEGHVLATASIKGTLIRIFSTQDGTLLQEVRRGADRAEIHS
VSFSPTAEWLAVSSDKGTVHLFRIKHLGNQDKTNTPPNSRLTLAASSSPFSFIKGVLPKY
FSSEWSVAQFRLPGDSEYIVTFGHEKNTLIILGLDGSFIRCKFDPASGKEMTQLEIHNFL
KSDKAS

Transcript Sequence

Gene sequence data has not been registered.